Chytrid spreading fast and furiously

This week we broke the news that chytridiomycosis, a rapidly spreading amphibian disease, has reached a site near Panama’s Darien region, leaving us little time to save the species there at risk of extinction. Here’s an updated map of how the pathogen is moving through the neotropics:

Chytrid spread
Chytridiomycosis has been linked to dramatic population declines or even extinctions of amphibian species worldwide. Within five months of arriving at El Cope in western Panama, chytridiomychosis extirpated 50 percent of the frog species and 80 percent of individuals.

Conservationists have been fretting for years about what might happen to Eastern Panama’s 120-odd amphibian species when chytrid hits. Chytrid is a disease that cannot tolerate extremely hot temperatures, so it tends to be most devastating in cooler mountainous regions of the tropics that remain cool and moist year-round. The mountainous regions of Eastern Panama are one of the last remaining strongholds of naïve amphibian populations in the New World, and species that tend to have a highland distribution and small ranges are the most vulnerable to extinction.

Press release: Smithsonian Scientists Find Deadly Amphibian Disease in the Last Disease-free Region of Central America

Toad Mountain harlequin frog (Atelopus certus)

The Panama Amphibian Rescue and Conservation Project has established an assurance colony for two species endemic to the Darien, including the Toad Mountain harlequin frog (Atelopus certus), shown here. (Brian Gratwicke, Smithsonian Conservation Biology Institute)

Smithsonian scientists have confirmed that chytridiomycosis, a rapidly spreading amphibian disease, has reached a site near Panama’s Darien region. This was the last area in the entire mountainous neotropics to be free of the disease. This is troubling news for the Panama Amphibian Rescue and Conservation Project, a consortium of nine U.S. and Panamanian institutions that aims to rescue 20 species of frogs in imminent danger of extinction.

Chytridiomycosis has been linked to dramatic population declines or even extinctions of amphibian species worldwide. Within five months of arriving at El Cope in western Panama, chytridiomychosis extirpated 50 percent of the frog species and 80 percent of individuals.

“We would like to save all of the species in the Darien, but there isn’t time to do that now,” said Brian Gratwicke, biologist at the Smithsonian Conservation Biology Institute and international coordinator for the Panama Amphibian Rescue and Conservation Project. “Our project is one of a few to take an active stance against the probable extinction of these species. We have already succeeded in breeding three species in captivity. Time may be running out, but we are looking for more resources to take advantage of the time that remains.”

The Darien National Park is a World Heritage site and represents one of Central America’s largest remaining wilderness areas. In 2007, Doug Woodhams, a research associate at the Smithsonian Tropical Research Institute, tested 49 frogs at a site bordering the Darien. At that time, none tested positive for the disease. In January 2010, however, Woodhams found that 2 percent of the 93 frogs he tested were infected.

“Finding chytridiomycosis on frogs at a site bordering the Darien happened much sooner than anyone predicted,” Woodhams said. “The unrelenting and extremely fast-paced spread of this fungus is alarming.”

The Panama Amphibian Rescue and Conservation Project has already established captive assurance colonies in Panama of two priority species endemic to the Darien—the Pirre harlequin frog (Atelopus glyphus) and the Toad Mountain harlequin frog (A. certus). In addition, the Smithsonian’s National Zoo maintains an active breeding program for the Panamanian golden frog, which is Panama’s national animal. The Panamanian golden frog is critically endangered, according to the International Union for Conservation of Nature, and researchers have not seen them in the wild since 2008.

Bd infection

Chytridiomycosis is a rapidly spreading amphibian disease that attacks the skin cells of amphibians (shown here) and is wiping out frog species worldwide. (Doug Woodhams, Smithsonian Tropical Research Institute)

“We would like to be moving faster to build capacity,” Gratwicke said. “One of our major hurdles is fundraising to build a facility to house these frogs. Until we jump that hurdle, we’re limited in our capacity to take in additional species.”

Nearly one-third of the world’s amphibian species are at risk of extinction. While the global amphibian crisis is the result of habitat loss, climate change and pollution, chytridiomycosis is at least partly responsible for the disappearances of 94 of the 120 frog species thought to have gone extinct since 1980.

“These animals that we are breeding in captivity will buy us some time as we find a way to control this disease in the wild and mitigate the threat directly,” said Woodhams, who was the lead author of a whitepaper Mitigating Amphibian Disease: strategies to maintain wild populations and control chytridiomycosis. This paper, published in Frontiers in Zoology, systematically reviews disease-control tools from other fields and examines how they might be deployed to fight chytrid in the wild. One particularly exciting lead in the effort to find a cure is that anti-chytrid bacteria living on frog skin may have probiotics properties that protect their amphibian host from chytrid by secreting anti-fungal chemicals. Woodhams recently discovered that some Panamanian species with anti-chytrid skin bacteria transmit beneficial skin chemicals and bacteria to their offspring. The paper, Social Immunity in Amphibians: Evidence for Vertical Transmission of Innate Defenses, was published in Biotropica in May.

“We are all working around the clock to find a cure,” Gratwicke said. “Woodhams’ discovery that defenses can indeed be transferred from parent to offspring gives us hope that if we are successful at developing a cure in the lab, we may find a way to use it to save wild amphibians.”

The Smithsonian Conservation Biology Institute serves as an umbrella for the Smithsonian Institution’s global effort to understand and conserve species and train future generations of conservationists. Headquartered in Front Royal, Va., SCBI facilitates and promotes research programs based at Front Royal, the National Zoo in Washington, D.C., and at field research stations and training sites worldwide.

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Media only: contact Lindsay Renick Mayer, Smithsonian’s National Zoo, 202-633-3081

Cute in any form.

Limosa harlequin frog (Atelopus limosus)

Highland color-form of the Limosa harlequin frog (Atelopus limosus)

Cute Frog of the Week: May 30, 2011

Camouflaged among the moss-covered rocks in the highlands and lowlands of Panama, the Limosa harlequin frog (Atelopus limosus) is difficult to spot even with its yellow clinging toes. These green-and-black-eyed amphibians leave their superb hiding places during the dry season and make their way to the fast-flowing streams of the Panamanian rainforest. Females lay their eggs in streambeds, where eager males wait to fertilize them. Laying clutches of eggs in faster-flowing waters may seem treacherous for the tiny frogs, but they brave the risk. Eggs that are laid in those areas of streams are less likely to be preyed upon, or to face competition from other frog species.

Limosa harlequin frog (Atelopus limosus)

Lowland color-form of the Limosa harlequin frog (Atelopus limosus)

Limosa harlequin frog tadpoles are not left to be swept away by hurried streams once they hatch. Suction disks on their bellies help anchor them to the rocks in the streambeds. However, the species seems to be losing its grip in its fight to survive. It is listed as endangered in the wild and the population is still decreasing. It is facing threats ranging from deforestation to pollution. Those threats are compounded by the ravaging affects of the chytrid fungus.  The Panama Amphibian Rescue and Conservation Project has brought the Limosa harlequin frog into captivity and is learning how to successfully breed them, giving hope for the survival of the species.

Photo credit: Brian Gratwicke, Panama Amphibian Rescue and Conservation Project

Every week the Panama Amphibian Rescue and Conservation Project posts a new photo of a cute frog from anywhere in the world with an interesting, fun and unique story to tell. Be sure to check back every Monday for the latest addition.

Send us your own cute frogs by uploading your photos here: http://www.flickr.com/groups/cutefrogoftheweek/

This time, it is not good to be a leader

Atelopus varius

Atelopus varius is just one of many species of frog that is critically endangered. (Photo by Brian Gratwicke, Panama Amphibian Rescue and Conservation Project).

Chytrid fungus is believed to have played a role in the disappearance of 94 of the 120 frog species thought to have gone extinct since 1980.  But that is not the only battle frogs are facing in the fight to survive.

No one issue can explain all of the population declines that are occurring at an unprecedented rate, and much faster in amphibians than most other animals, the scientists conclude in a study just published in the Annals of the New York Academy of Sciences.

The totality of these changes leads these researchers to believe that the Earth is now in a major extinction episode similar to five other mass extinction events in the planet’s history. And amphibians are leading the field – one estimate indicates they are disappearing at more than 200 times that of the average extinction rate.

In this case, it is not good to be the leader.

Cindy Hoffman, Defenders of Wildlife

A sad story with a golden glimmer of hope

Panamanian golden frog (Atelopus zeteki)
Panamanian golden frog (Atelopus zeteki)

Cute Frog of the Week: May 2, 2011

Critically endangered since 2004, the endemic Panamanian golden frog has suffered a population decline of 80 percent over the last 10 years. An angular, dark yellow frog with a trademark swagger, the golden frog is a symbol of Panama’s abundant biodiversity. It is also well-known for its potent skin toxins, which it uses to protect itself against predators. A single frog’s skin contains enough nerve-disabling poison to kill 1,200 mice! Frequently found in and around high mountain forest streams, the golden frog in its golden-yellow, liberally spotted morph (individuals come in various colors and patterns) visually warns potential predators to stay away.

Despite its toxicity, the frog has found itself nearly defenseless against chytridiomycosis, the amphibian disease epidemic that has recently devastated frog populations and biodiversity throughout Central America. Because the range of this frog species is limited, extinction seems all too likely, unless human intervention succeeds in keeping the species around in captivity. Fortunately, an in-situ conservation program in western Panama (the El Valle Amphibian Conservation Center, aptly named EVACC) has led the conservation effort as part of the Panama Amphibian Rescue and Conservation Project.

Frog declines raise a number of fascinating questions.  For example, recent studies have shown that Panamanian golden frogs are making a last-ditch attempt to ward off infection by thermally killing the pathogen. Fortunately, researchers believe that the chytrid fungus does not thrive at temperatures 5 C above the frog’s normal body temperature. The frog attempts to increase its body temperature above normal levels by moving within its habitat to warmer places. As an ectotherm (a cold-blooded animal), the frog can only control its internal temperature by these behavioral adjustments to its external environment. Nonetheless, these efforts by wild golden frog populations may by in vain. Chytridiomycosis has so far prevailed, but intense conservation efforts in Panama keep hope alive. Panama’s symbol of amphibian beauty continues to awe humans in safe environments like EVACC. Re-introduction of these individuals and any offspring into the wild will, we are assured, only take place if and when the epidemic has abated.

Photo credit: Mehgan Murphy, Smithsonian’s National Zoo

Every week the Panama Amphibian Rescue and Conservation Project posts a new photo of a cute frog from anywhere in the world with an interesting, fun and unique story to tell. Be sure to check back every Monday for the latest addition.

Send us your own cute frogs by uploading your photos here: http://www.flickr.com/groups/cutefrogoftheweek/

Science Project: A Cure for Chytrid

The author with Brian Gratwicke at the SCBI autumn conservation festival

One autumn day in 2010, I was at the Smithsonian Conservation Biology Institute, (SCBI) and I met Brian Gratwicke. Brian is a frog expert, a herpetologist, and is working in Panama to save frogs from a deadly fungus. The fungus is called chytridiomycosis, or chytrid. Brian told me of one cure for the chytrid fungus. It is a bacterium, called Janthinobacterium lividum. J. liv. for short. He said that the cure can come off the back of some redback salamanders, (Plethodon cinereus) which I realized, live in my back yard in northern Virginia. He said that it was kind of rare to discover the salamanders that have the bacteria on them. You need to swab the salamanders, and streak the bacteria on their backs onto agar plates. He said that if the salamanders carry J. liv., a milky purple spot will appear on the plate, that you can’t miss it. I told him I am very interested in herpetology, and that I could the do the experiment by the winter. So that is when I decided to try and find Janthinobacterium lividum. Brian said it was a great idea, but he would be very surprised if I found J. liv.

Searching for chytrid cure on the backs of salamanders - Tommy's 6th grade science fair project

I started with a question. My question was; is J. liv really on the backs of the redback salamanders in my backyard? To perform the experiment, I needed some supplies. I got petri dishes, agar, sterile swabs, distilled water, gloves, a plastic terrarium, my camera, and an instruction book (on how to prepare and streak petri dishes). Soon I had my lab set up. I microwaved the agar until it was completely liquid. Then I carefully lifted up the lids of the petri dishes, and poured the liquid agar in. I labeled them from one to ten. I put my gloves on, and got the terrarium. I was ready to catch some salamanders.

Isolating Janthinobacterium lividium with a sterile swab

Isolating Janthinobacterium lividium with a sterile swab

Soon I was outside on the lookout for anything that was small, and that crawled. I went to my backyard and started looking. I looked under logs, rocks, and bricks. After many false alarms with large earthworms, I came across a redback salamander. I picked it up with my gloves, and put it in my terrarium. Then I ran back inside. I set down the terrarium and began my work. I used my supplies to swab the salamander, and photograph it. I then returned it to its log, and started looking for another salamander. After the next few weeks of hard looking, I had done this for all my ten of my petri dishes, with salamanders, collected from different locations. I just needed to wait for the bacteria to grow. I waited for about three days. By then, the color started to appear on the petri dishes. On dish number one, there were orange and clear colors, but no purple. It was the same for all the next eight. On petri number ten, things were different. It took much longer to culture bacteria on it.

Pure cultures of purple bacteria, the purple comes from the anti-fungal chemical violacein.

Pure cultures of purple bacteria, the purple comes from the anti-fungal chemical violacein.

After three additional days, I saw it. In a small spot in the middle of the petri dish, was a milky purple spot. I couldn’t believe what I was seeing. I had found the bacteria. I took photos of all the petri dishes, and wrote the dates that the color appeared on them. I took many photos of the purple J. liv. colony. I was so happy.

It was very lucky that I had found J. liv. After I found the bacteria, I bought two more petri dishes. I took the original J. liv. culture and swabbed it. I then streaked the new agar plates with J. liv. I waited. Within three days, the color started to appear. The whole agar plates were covered in the milky purple J. liv. I wrote down my observations. I could culture and grow J. liv. in gigantic amounts. I found Janthinobacterium lividum, and I was proud of myself. I couldn’t wait to tell Brian Gratwicke!

–Tom McCarthy, 6th grade Chesterbrook Elementary School in McLean VA.

In the Field, In Search of a Cure

Rocket frog with tadpoles

Researcher Denise Küng is using emerald glass frogs and rocket frogs (shown here with tadpoles) in Panama to see if she can develop a treatment for chytrid. (Photo by Brian Gratwicke, Panama Amphibian Rescue and Conservation Project)

What comes to your mind when you think about bacteria? They are generally feared as disease agents among humans, but they do much more than cause infections. It seems like mutualistic microbial communities are common in invertebrates as well as vertebrates. Humans, with more than 600 types of bacteria residing only in their mouth, are no exception. Several cooperating bacteria can develop biofilms and create a matrix of living cells and bacterial products, and the community structure of microbes on a host could be connected with resistance to disease. Let’s say a bacterial community is disturbed by antibiotics and its competitiveness is thus reduced, then pathogens can exploit this and establish themselves in a host.

The skin of amphibians is host to a diverse microbiota. They live in damp or aquatic habitats which are potentially pathogen-rich environments. As protection against infections, amphibians developed skin defenses, such as antimicrobial peptides secreted by glands in their skin and microbial communities with antimicrobial activity. By doing bacteria removal and additional experiments, scientists found evidence for enhanced or decreased amphibian health depending on alterations of the microbial community structure on the skin. In some amphibian species, antimicrobial peptides seem to provide protection from infectious diseases such as the fungus Batrachochytrium dendrobatidis and may help to prevent population declines.

Denise with Colostethus

Denise hopes to find a treatment for frogs in nature so they can safely coexist with chytrid. (Photo by Brian Gratwicke, Panama Amphibian Rescue and Conservation Project)

To find out more about the bacterial communities and antimicrobial peptides on the skin of amphibians, I’m currently in Panama working with the Panamanian rocket frog, Colostethus panamensis, and emerald glass frog, Centrolene prosoblepon. I’m going to look at their skin microbiota and how it changes after several weeks living in captivity. Will it stay the same or are some members of the bacterial community getting lost?

By giving some of the rocket frogs a bath in a solution with bacteria, I’m trying to increase the density of a particular bacterium on their skin. This bacterium has been shown to decrease the growth of the chytrid fungus Batrachochytrium dendrobatidis in the lab. If it’s possible to amplify its density on amphibian skin over a long period of time, this might be a possible treatment for frogs in nature to allow them to coexist with the pathogen in infected environments.

The emerald glass frogs seem to be able to survive in environments infected with Batrachochytrium dendrobatidis. They must have found a form of protection from the fungus on their skin. I am taking a closer look at the antimicrobial peptides on their skin. I also bathed them in water every day for a week and then used their skin washes to treat another group of the rocket frogs with the hope that whatever protects the glass frogs from the fungus will go in the water and from there onto the skin of the rocket frogs. Analyzing the skin swabs of the frogs in the lab will show whether this treatment changed the rocket frog skin microbiota, antimicrobial petides or both.

Denise Küng, University of Zurich

Cheyenne Mountain Zoo Finds Endangered Frog In The Jungles of Panama

Limosa Harlequin Frog

Limosa Harlequin frog. Photo B. Gratwicke, Smithsonian Institute

A Cheyenne Mountain Zoo team led by President Bob Chastain is back in Colorado after spending nine days in the jungles of Panama as part of a global effort to save amphibian species on the verge of extinction due to chytrid fungus. The team was searching for the endangered Atelopus limosus harlequin frog, and collected one female, two males, and a juvenile (sex to be determined). Until this trip, there was just one Atelopus limosus female and four males in captivity in the world. The female found by the team is especially important in creating a viable, sustainable population.

“I saw first-hand how grave the situation is, and it’s sobering,” said Chastain. “But there’s no time for despair. There’s work to be done and we have to dig in. As Americans, we are no strangers to digging in and dealing with monumental problems.”

Over one-third of the world’s amphibians are threatened with extinction. The rapidly spreading chytrid fungus is taking a huge toll, wiping out 30% – 50% of species in its path, species which could hold the key to significant medical advances against HIV, cancer, and other diseases.

“The forest is getting quieter and quieter,” said Chastain. “During our first trip in November of 2009, the sound of frogs was almost deafening. That’s not the case anymore.”

This was the fifth expedition for Cheyenne Mountain Zoo. The team of five spent as many as 13 hours a day hiking the remote, mountainous area of Cerro Brewster looking for the Atelopus limosus, a half-dollar-sized frog that blends in with the dark rocks and green moss. The only tools at their disposal were walking sticks to move leaves and rocks.

“It’s like looking for a needle in a haystack,” said Chastain.

When a specimen was found, the team swabbed the frog to check for chytrid. Each frog was then placed in a plastic bag and transported to a bio-secure breeding facility at Panama’s Summit Zoo, where another Cheyenne Mountain Zoo staffer assisted with veterinary care.

“We’re seeing entire populations go extinct before our eyes,” said Chastain. “By finding these frogs and treating them, we’re at least giving them a chance at survival. In the words of ecologist Aldo Leopold, to keep every cog and wheel is the first precaution of intelligent tinkering.”

Cheyenne Mountain Zoo hopes by getting involved before amphibians are gone forever, future generations of scientists will have the resources necessary when it comes to curing environmental disasters and making medical history.

Cheyenne Mountain Zoo is a founding partner in the international Panama Amphibian Rescue and Conservation Project initiative. The organization’s mission is to establish amphibian assurance colonies and develop methodologies to reduce the impact of the chytrid fungus so captive amphibian species may one day be re-introduced to the wild. Cheyenne Mountain Zoo was joined this trip by representatives from other Panama Amphibian Rescue and Conservation Project partners, including Houston Zoo’s El Valle Amphibian Conservation Center (EVACC), Smithsonian Tropical Research Institute, and Summit Zoo. Zoo New England oversaw the veterinary support. Africam Safari, ANAM (Autoridad Nacional del Ambiente), Defenders of Wildlife, and Smithsonian’s National Zoological Park also fund and provide support for the project.

WATCH THE VIDEO INTERVIEW HERE

Katie Borremans, Cheyenne Mountain Zoo

Snakes where frogs should be!

As the fungal disease, chytridiomycosis, wipes out frogs and other amphibians across Panama, snakes appear to be more common than previously—but are they really, and will they last?

Eyelash viper

Chad Montgomery took this photo of an eyelash viper, Bothriechis schleglii, eating a frog in El Cope, Panama, one of the most studied frog decline sites here.

Panama’s ongoing “Amphibian Armageddon” completely changes who eats whom—aka the food chain—near the highland tropical streams where frogs and amphibians used to abound.

Researchers from the Panama Amphibian Rescue and Conservation Project’s latest expedition to Cerro Brewster in Central Panama report that where the frogs used to be, they are now seeing snakes—deadly eyelash vipers, to be exact.

This weekend my family was visiting from the United States and we ventured out on my favorite easy day trip from Panama City–a drive up to El Valle, a little town nestled in the crater of an extinct volcano.

Our first stop was El Nispero, a small private zoo, home to the El Valle Amphibian Conservation Center, EVACC, a project initiated by the Houston Zoo with some logistical support from the Smithsonian Tropical Research Institute.

EVACC is housed in a new building—with a beautiful small exhibit about Panama’s endangered frogs where you can see one of the last remaining golden frogs, Atelopus zeteki—named for James Zetek, one of the founder’s of STRI’s Barro Colorado Island research station in the 1920’s.

Edgardo Griffith is pretty much the powerhouse behind EVACC. He was in the lab there and was kind enough to take a break to talk to me about the most recent rescue project trip up to Brewster Hill.

The last visit to Brewster, which also included a big group of people from the Cheyenne Mountain Zoo in Colorado, was in November, 2009.  That team found a lot of frogs, but many of them were already infected with the fungus.

This time they found very few frogs, although they were psyched to have found a female Altelopus limosus, the Limosa harlequin frog, which the rescue project recently bred in captivity.

Instead they found a lot of snakes. Edgardo speculated that because there are fewer frogs it is not so much that there are more snakes, but that the snakes have to work harder to find frogs and are concentrated around the streams where a few frogs remain, so the team was just running into them more often.  But without more careful work, it is hard to say.

Chad Montgomery, now a professor at Truman State University in Missouri, did his post-doctoral research with Karen Lips from the University of Maryland on the effects of amphibian declines on frog predators at El Cope, one of the most studied frog decline sites in Panama.

He told me: “In 2005, the first year following the amphibian decline, we saw a change in the snake community, with snake species that are more dependent on amphibians as food (such as Sibon and Leptodeira) becoming less common relative to those snake species that are not as reliant on amphibians as prey (such as Oxybelis and Dipsas).”

“The ecosystem can’t support the previously large snake community,” he said. “Ultimately, loss of amphibians probably causes local extinction of some snake species and severely reduced population sizes in those species that remain.”

According to Julie Ray, the director of the La Mica Biological Station in El Cope, it’s unusual to see so many eyelash vipers, which have declined in El Cope following the frog decline. Eyelash vipers feed on frogs, lizards, mice, etc. She also said that Fer de lance, Panama’s most poisonous snake, actually feed on dying and dead frogs.

One of the truths that the rescue project reveals is how little we still know about playing Noah.  Many of Panama’s endangered frogs have never been studied in the wild or kept in captivity.

Not only do rescue project researchers have to figure out what frogs eat and what they need to survive and reproduce in a zoo, they still have no idea how their habitat will change as a result of the disease and when, if ever, it will be possible to reintroduce captive frogs back into the wild. We need to know much more about how frog extinctions change insect and animal communities…and that take precious time and money, which is why frog rescue projects need your support.

–Beth King, Smithsonian Tropical Research Institute

Detailing the Darien: Defenders Magazine Profiles a Riveting Rescue Expedition

Mark Cheater

Mark Cheater accompanied the rescue project to the Darien last year, writing about it for Defenders magazine.

Ever wonder how scientists find and protect rare amphibians? I wanted to find out, and I persuaded the folks at the Panama Amphibian Rescue and Conservation Project to let me accompany them on an expedition to the Darien region of Panama last June in search of rare Toad Mountain harlequin frogs. I discovered that not only is working in the field physically demanding—spending long hours hiking through jungles and up rivers to find and capture the frogs—but it’s also dangerous, involving frequent encounters with venomous snakes and scores of biting insects. To learn more about the hazards and rewards of rescuing  imperiled frogs, check out my story—and an accompanying behind-the-scenes slideshow—in the new issue of Defenders magazine:

http://www.defenders.org/newsroom/defenders_magazine/winter_2011/rescue_at_toad_mountain.php

Mark Cheater, Defenders of Wildlife